rs50792514 SNP Detail

Summary

• ID
  rs50792514
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52028078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGCTGTCC TGGAACTCAC
  TCTGTAGACC AGGCTGGCCT CGAACTCAGA AATCCATCTG CCTCTGCCTC CCCAGTGCTG
  GGATTCAAGG CATGCACCAC CACCTCCCAA TGTGTTTTGT TTTCTTCTTG GCAGGCAATC
  CAGCTGGGCT GAAAAAGGAT CTCGAAGAAG CTTGAATTTT CATTTCCCTG ATAGCTGAGA
  M
  TGTCAAACCC TTTGGCAGAG TTAACCAGCC ATTTGTTTCT TCTTTTGAGA ACTATCTGTT
  CAGTTCATTG TTCCATTCAC TGAGTGAAGA TTCATTTTCT TAGTATTTGG AATAAATGAT
  CTTAAATGTT CACTAAGAAG CCTGTGGACT TCAGTGGAAC CTGTCCTAGA ACTCACTCTG
  TACACCAGGC TGGCCTCAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137728874	ENSMUSSNP5809886	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50792514					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52028078 () rs orientation: forward

Symbol	Name	Function Class
Gm60186	predicted gene, 60186	within coordinates
Rr387210	regulatory region 387210	935 bp downstream
Rr387211	regulatory region 387211	1998 bp upstream