rs50794404 SNP Detail

Summary

• ID
  rs50794404
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:15082144 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATTATCAAC AGTACAAAGT ACAACTTGGC TTCAGAACCT
  TGGGTTGAGA CTTTACAAGT CAGATGATAG ATTCACCATT CAAAAGTATT TGAGATTTTG
  G
  AGATGCTCAG ATATCCTACC TGTTACTCTA AGCCAAGGAA TTGGCTTAAA AAGTCATGGA
  GGGGGAGAAC ATGGTCAACA CAATGATCAA TTCCCCCCT                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss147916267	ENSMUSSNP6885418	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs50794404					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:15082144 () rs orientation: forward

Symbol	Name	Function Class
Gm17019	predicted gene 17019	within coordinates
Gm71745	predicted gene, 71745	within coordinates
Rr121527	regulatory region 121527	1637 bp distal
Rr121528	regulatory region 121528	331 bp distal
Rr121531	regulatory region 121531	231 bp proximal
Rr121533	regulatory region 121533	782 bp proximal