rs50799853 SNP Detail

Summary

• ID
  rs50799853
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:20773114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACAGAAAC ATCTGGACAG
  TGGTGGGGGG AGGGGGAAGG AGAAGGTAGG GAGATGAACT GCATCCTAAA GGAGAGTGGA
  TAAAATATGC CACTGTATAA TATATATATA TATACCCTTA CAGTGGAACA CTGCTCATCA
  ATGTAAGGGG AAACAGTTGA AGCAGTACGA ATGTAGCTAA ACACTTGCAA AATCAAAGAC
  K
  CCAACTCTAA GACATTATGG GGTGAATGAA TGAAGTGACT CTGTCATTTA CAAGCTATAG
  CAGGGGAGAC AGATCACTGG GCTGCCTGAC CTAAGTTAGA AGTTGGAGAC ATTTTTATAT
  ATGGGACTTT GGAAGGATGA AACAATAATT CTGTATCCTG ATTAAATAGT TACACACTAA
  ATCTATGCAC TAACCTCATA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	MSM/Ms
ss131781683	ENSMUSSNP1754483	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	MSM/Ms
rs50799853					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:20773114 () rs orientation: forward

Symbol	Name	Function Class
Gm32213	predicted gene, 32213	1952 bp downstream
Lgalsl	galectin like	462 bp downstream
Rr443482	regulatory region 443482	255 bp proximal