rs50802750 SNP Detail

Summary

• ID
  rs50802750
• Variation Type
  SNP
• Alleles
  A/G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34098676 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTGC TTCCCAGTAC TTGGGAGGGG
  D
  GGGGGGGGAC AGAGTCAGGT GAATC                                      
  
  D = A/G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss147537722	ENSMUSSNP5987900	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
ss324918812	CHEV_15_34028285	CHEVERUD	SCREENING_POP	f	SNP			T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs50802750					SNP	A	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34098676 () rs orientation: forward

Symbol	Name	Function Class
Mtdh	metadherin	within coordinates
Rr500667	regulatory region 500667	1311 bp distal
Tssr131017	transcription start site region 131017	978 bp upstream
Tssr133963	transcription start site region 133963	986 bp downstream