rs50809579 SNP Detail

Summary

• ID
  rs50809579
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31350973 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTT AAATATGCTT AAAAGAAACT
  S
  CCTGGTACCA GACGTTAGAC GTTTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145456937	ENSMUSSNP967276	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	C
ss325358799	CHEV_17_31268944	CHEVERUD	SCREENING_POP	f	SNP				C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50809579					SNP	C	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31350973 () rs orientation: forward

Symbol	Name	Function Class
Rr334776	regulatory region 334776	1173 bp distal
Rr341222	regulatory region 341222	1974 bp distal
Rr341223	regulatory region 341223	1229 bp proximal