rs50814815 SNP Detail

Summary

• ID
  rs50814815
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:33913493 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCATCTGC CAGCCAGCGG
  AGACCCAGAG AACTGTGAGT GCTACATCCC AGAGAGCTTG GGAAGGGCTT CTAGGAAGCC
  GGGGCTGAGG GGAGATGGTG GGAGACAGCA GCCTGTGATG GCATGGATAG GGTGGTGAAA
  ATCCCTACCT CTCCTGATGC CCATCAGAGT TCTGGCACCG GAGGGCCTGC CTGGCCTGTT
  G
  ACCCTGGTCT GGGCGTCTCT TTTGTGGCCA GCCAGTCAGG ACCAGTGTTG TCACTTGTCA
  TCAGGATAGG GATCGACAAA CAGGCCTGGC AGAGTGCACC AAGCTCCTTC AATTCCTCAG
  TTAATGATGG CGCCTGTTTA TGGAGGGCAT CACTTATTTA TGAGGTGACG CTCAGCAGTG
  TTGGTGGGTC TACATCAGGA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss131941563	ENSMUSSNP151379	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50814815					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:33913493 () rs orientation: forward

Symbol	Name	Function Class
Kcnip1	Kv channel-interacting protein 1	Intron
Kcnmb1	potassium large conductance calcium-activated channel, subfamily M, beta member 1	Intron
Rr444879	regulatory region 444879	470 bp distal
Rr444880	regulatory region 444880	within coordinates
Rr444881	regulatory region 444881	1930 bp proximal
Tssr100887	transcription start site region 100887	250 bp downstream
Tssr100888	transcription start site region 100888	196 bp downstream