rs50820126 SNP Detail

Summary

• ID
  rs50820126
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:20464523 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGAGTTACT CAATCTTTCT AAGTTCCTGC CCATTGACTT
  TAGATTTATG TAGAAAAACA TGGTAGAAAA CTTTGAACAC CCGGAGAAGC CACAGCCCTG
  S
  ACAGTCCAGA AAACTCCATT CATCTATCTC ATCTAGCCTC AGAAAGTTTC CTTCAGTCTC
  CCCAGCTTAA GCAAAGAGGC AGATGGTACC GAGAAACAGT                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	PWD/PhJ
ss52176235	NES15232414	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	PWD/PhJ
rs50820126					SNP	G	G	G	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52176235	NES15232414	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:20464523 () rs orientation: forward

Symbol	Name	Function Class
Pde7b	phosphodiesterase 7B	within coordinates
Rr226877	regulatory region 226877	279 bp proximal
Tssr96955	transcription start site region 96955	741 bp downstream