rs50829327 SNP Detail

Summary

• ID
  rs50829327
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:116588471 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTTATTTT AAATAATATT
  TAGTTTTTAT TAACATATAG CATATATATA TATATATATA TATATATAAA ATGATGTATC
  TCATTACTTT CACATGTATA TATAATGCAA TGTGTTCACA CCCCCATTGC CCTCTTTTGT
  CCCCTCCCAC ACCTGCGGAT CCCTTTTCTT TTCCAAGTTT GTACTCCTTG AACTTTCATG
  Y
  CTTTTTTGCA ACCCCATGGT TTTAATTAGA GTTACTTACA GGAAGACAGG TAAAGCATAT
  GGGCAACTTA CCAGTGGCTA CACCAGGGAA AAACATCTTT GTCTTAGCAA CCATTAACTA
  TAAATCCTCA GGAATGGGTG GGACCCTGGG TGAATTCTTG ATGTTTCTTG ACTCCCTACA
  AAAGGAGAGC TACCTGGACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145742513	ENSMUSSNP6618622	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50829327					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:116588471 () rs orientation: forward

Symbol	Name	Function Class
Rr381374	regulatory region 381374	1517 bp upstream