rs50836402 SNP Detail

Summary

• ID
  rs50836402
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:116588756 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGAAAAAC ATCTTTGTCT
  TAGCAACCAT TAACTATAAA TCCTCAGGAA TGGGTGGGAC CCTGGGTGAA TTCTTGATGT
  TTCTTGACTC CCTACAAAAG GAGAGCTACC TGGACATTCA AAGCTACACG CTTTAGATGT
  GAAGGCTTTT CAACCATTTC TGCATGTTGG TAGCAAATGA GTTCTCTTGG ACACTTGCTC
  R
  TCTTTAGTAT ATTCCAGTTT GCTTGGTCTG GAGGTTTGGC TCTGCCACTC ACTTGGGCAG
  CCTTAACTTT TGAATCTGTG AATACAATGA CAACGGATGT TTCCTGGGAT TATATATTAA
  AACGGAATAA AAAGAAGTGC TTTGAACAGT TGAGCATGCC GTAAGTACCC AGTAACGACT
  ACAAGAACCT GTGCCACCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145742530	ENSMUSSNP3452398	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50836402					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:116588756 () rs orientation: forward

Symbol	Name	Function Class
Rr381374	regulatory region 381374	1232 bp upstream