rs50841868 SNP Detail

Summary

• ID
  rs50841868
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:116588313 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TCAGGCTAAT GTGGCAAGCA AGAGCTTTTA CCCACAGAGA
  CATCTTGTCA GCCTCCCACA TTTATTTTAA ATAATATTTA GTTTTTATTA ACATATAGCA
  K
  ATATATATAT ATATATATAT ATATAAAATG ATGTATCTCA TTACTTTCAC ATGTATATAT
  AATGCAATGT GTTCACACCC CCATTGCCCT CTTTTGTCCC C                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145742501	ENSMUSSNP5685430	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50841868					SNP	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:116588313 () rs orientation: forward

Symbol	Name	Function Class
Rr381374	regulatory region 381374	1675 bp upstream