rs50846968 SNP Detail

Summary

• ID
  rs50846968
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:78183692 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G ATAGAAGTTG GATGTTGCCA TGTTAAATCA TGAAATCTCT
  TGGGATTAAT GAGTGTATGT GAATAGCATG TGAAGGACAT ATGAATAACA CCTCTTCTTG
  R
  AGAAGTTCTG GAGCCCTAGC CTGGTGGTAT ATACACTGGG GAGGCAGAGC CAGTAGGATC
  AAGAGCTCAA GGTTAAACTA GGCTTTATAT TGAGTTTGAG G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss144741484	ENSMUSSNP4062499	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs50846968					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:78183692 () rs orientation: forward

Symbol	Name	Function Class
D1Mit215	DNA segment, Chr 1, Massachusetts Institute of Technology 215	548 bp distal
Rr413697	regulatory region 413697	1098 bp proximal