rs50847942 SNP Detail

Summary

• ID
  rs50847942
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:125569465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCAGCTACA TAGGAGACTG GGGTAGCAGG ATACAAGCTC
  AAGCAAAGCC TGGACTAGAG TGAGTTCAAA GCTAATAATA ACTTAAGAGA AGGAGATAGG
  W
  GATGCTTGCC TAGCATGCAT GAGGCCATGG GTTTCGTCCC TAGTACCATT GGTGGGGGTA
  GAAAAGCCAT TAATGTGAGA GCGGGCTCTT CAGTAAGCT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147486125	ENSMUSSNP2868855	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50847942					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125569465 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr70	DNA Segment, Chr 2, Derry C. Roopenian 70	1810 bp distal
D2Mit398	DNA segment, Chr 2, Massachusetts Institute of Technology 398	1807 bp distal