rs50848750 SNP Detail

Summary

• ID
  rs50848750
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:25671621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTGGAACC CAGAAGTCCT CCCTCCCCAG GTGTGGCAGG
  TCTTCACAGC TCCATTAATG CTAAAGCTAG TCTTCCATCT CACCTGCAGC CACAAGACTT
  A
  GTTTTTTTTT TTCTTCTGTT GTCATACCCG GCCCTCCCTG TGCCTCCTAT CTCTTAGGAG
  GACAATGTCA CCGGACTTGG GGCCACTCAG ATAATCCAT                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145389300	ENSMUSSNP2013622	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50848750					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25671621 () rs orientation: forward

Symbol	Name	Function Class
Gm63608	predicted gene, 63608	within coordinates
Rr523576	regulatory region 523576	611 bp distal
Tekt4	tektin 4	1894 bp upstream
Tssr143159	transcription start site region 143159	1072 bp upstream
Tssr143160	transcription start site region 143160	1880 bp upstream