rs50848778 SNP Detail

Summary

• ID
  rs50848778
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:10992044 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTCTCTTG CATTTTTACA
  ACAAAACAAA CAAAATAAGG AATAAGACAC AGCATCTTTC ACTATTCTAT ATTTTACTAG
  CACAACCAAA GCTATGTGTT GCCCACAACA TCGTATAGAC TCAGTACAGC CACGGAGGCT
  TCCTCTAAGA CAAAAGGGGA CACTTTCAGG GTAGAGTCTC TGGCTGATCA CTTGAGCAGG
  R
  AAAAAAAAAG TGATTTCTAA GTTACTGATC TTAGAAGGGG TCACTTTTCT GGGCATATTT
  CCCACAACAA AGTCCAAAAC AGATGAACAG AAAGAACTTG TTTCTGATTA CAGCATCACT
  GATACATATA TGGAGAGTAG AAGAGGTCTG ATGCTCTCTA ATTAAATGTC CCCAGCTTTC
  CCATTAGAGA TGCTGAACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
ss61741554	NES17678359	PERLEGEN	MM_PANEL2	f	SNP		A	G	A	G	G		G	A		A	A	A
ss148669471	ENSMUSSNP5104517	ENSEMBL	ENSEMBL_Sanger	f	SNP	G						G
ss324260890	CHEV_13_10941254	CHEVERUD	SCREENING_POP	f	SNP										A				G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
rs50848778					SNP	G	A	G	A	G	G	G	G	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61741554	NES17678359	PERLEGEN	MM_PANEL	f	SNP	A/G