rs50854346 SNP Detail

Summary

• ID
  rs50854346
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:140544923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATGTGTATG GGTGTTTTGC CTGCCTGTGT GCCTGTGTGC
  TATGTTTATG CCTGGTGCCA GTGGAGGCCA GAAGAGGGCG CCAGCTGTCT TGGAACTGGA
  R
  TTACAGATGG TGGTGACTTG CCACGTGGGT GCTGGGAATT GGACCTCCTC AGTTCTCTGG
  AGGAGCAGCC AGTGCTCTTA TTTTTAAATT GTGACGCGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147714053	ENSMUSSNP3858469	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50854346					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140544923 () rs orientation: forward

Symbol	Name	Function Class
Gm13032	predicted gene 13032	101 bp downstream
Padi1	peptidyl arginine deiminase, type I	Intron
Rr603557	regulatory region 603557	518 bp distal
Rr603558	regulatory region 603558	16 bp distal