rs50868132 SNP Detail

Summary

• ID
  rs50868132
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25953824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAAGACAA TTCAGTATCA
  TCAAATTACA AGTTGAGAGG CTGTATTAAG ACACTGCTTG AAGTGAAACA CTTCTCTCAC
  AGAAAACTAA AATGGATTTT ACAAGGAGTT TTTAACATTC ACTAAGCATC CTAATTAACC
  TTTGTCAGGT AGAATTAAAG CAACCAAGAA GTTTAACAGA ATCCAAAGAC ATGCAGTTGG
  Y
  GGTGGCATTT TCATCCCAAG TCTCCAGCAG AGGGTTTGTT ATTTTTCCAG GGTAATTTTA
  TTGTATGGGG AGGAAAGGAA GGGTCGGTTT CATTTTAAAC CAAACATGGC TCCACCTGGA
  ACAAGAGGAA ACTTTGCCCT GCCAGAGGAT CATAGATATA TTCTAAGTAG TATTATAAAT
  TTCTCACTAA TTATGTTTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60978855	NES16140098	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	C	C	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs50868132					SNP	C	T	C	C	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60978855	NES16140098	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25953824 () rs orientation: forward

Symbol	Name	Function Class
Vmn1r-ps86	vomeronasal 1 receptor, pseudogene 86	681 bp upstream