TCCTGCTCTG GAATTAAAGG AGTGTGCCAC CATCACCCAA CTTCAAATAC CTTTTCAGTG AAGAAAAAGG CATCAGACTT TATGGGTTAC TTGAGTTTAC CCAGCTTAGA AAAAGTAAGT ACTTAGCCAC AAAGACCTAT GTAGTCATTC TTCATTTGTA CATGGGGCCT TTCTGGTTCT CTGGTGGAGT TGGTTATTTT K TGTTTAACTG GTTTTTAGTG ACCAAAGGCA TTCTATAAGG CCTTAAGAAT AAGGTTTTTG ACATACCAAG ATATATATAT ATATATTTAA AATTTTTTTA GGTCAACAGT CTCAGAGATG TTTCTCTTAA TTTATCTACT TTGGAGTTCT CTGACATCAG GGATAAATTC AGATTCTGCA TCCATAGGGG GCCAGGCTGT K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BTBR T<+> Itpr3 |
CAST/EiJ |
FVB/NJ |
KK/HlJ |
NOD/ShiLtJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss52444343 | NES15422751 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | G | G | G | G | T | G |
SNP Consensus Information | |||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BTBR T<+> Itpr3 |
CAST/EiJ |
FVB/NJ |
KK/HlJ |
NOD/ShiLtJ |
PWD/PhJ |
WSB/EiJ |
||||
rs50883901 | SNP | G | G | G | G | G | G | G | G | T | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss52444343 | NES15422751 | PERLEGEN | MM_PANEL | f | SNP | G/T |
Location: Chr12:71368882 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
4930474H06Rik | RIKEN cDNA 4930474H06 gene | 422 bp upstream | ||||||
Rr267972 | regulatory region 267972 | 319 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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