rs50884137 SNP Detail

Summary

• ID
  rs50884137
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121583343 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TTTAACATGA ACAAGGACTG TTAAGGACAC AGAAATAATT
  CTAGGCACCA GTGACAAAAC AAACAAAGTA ACTAAGAAAA AAAGAATGGC TTCAGAAATT
  W
  TAAAAAACAA ATCCTTAACT CTAATAAGGA TCCTTAAAAA ATGGTTCTTG GAAATAAAGT
  TAAATCAAAA ATTCTCTGGA AAGTGTGGAG AAAATGTCTT G                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135729231	ENSMUSSNP3027691	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50884137					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121583343 () rs orientation: forward

Symbol	Name	Function Class
4633401B06Rik	RIKEN cDNA 4633401B06 gene	1122 bp upstream
Abcd3	ATP-binding cassette, sub-family D member 3	within coordinates
Rr584170	regulatory region 584170	813 bp proximal
Tssr35428	transcription start site region 35428	1878 bp upstream