rs50891621 SNP Detail

Summary

• ID
  rs50891621
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:100168176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTTATAC AGCGTGTCCG
  TCATTAAACA TTTGAACCTT GAGCAGACTA GCATGTCTTG GTTCCATTAT TTCTCGACCC
  GCCTAGGTCG GCCCCAACAA TTTGGCGAAC CAACTCGAGA CCTGAGAATG GCAGAAGACA
  CCGGAAGAAA CACTGCTGGT ATGGAGCTCC ACAGATAGAA AAGAATTAGA AAATTCGTAC
  T
  GGAACGCGGA GAAGCAACGG GCAAAAGGTT GCTAAGGTGT GGTAAGGTCT GAGCTGGAAC
  TGCACTGACC CGCGCTGGAT CCGCTCAAGT TCAGCAGTGA TATCAGGATC TAGGAACATT
  AACAGGCAGT CGGCCACAGC TTTCAGAAGC TACTTTTTAG GCGAGAGAAA TAAAAGGGTT
  TGGATTAAAT AATCAGGTGG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148473239	ENSMUSSNP4741436	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs50891621					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100168176 () rs orientation: forward

Symbol	Name	Function Class
Gm56733	predicted gene, 56733	within coordinates
Rr391198	regulatory region 391198	within coordinates
Tssr4717	transcription start site region 4717	192 bp downstream
Tssr133109	transcription start site region 133109	1105 bp downstream
Tssr133110	transcription start site region 133110	1390 bp upstream