rs50891785 SNP Detail

Summary

• ID
  rs50891785
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:30527593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATGATGAA ATAAGTGATT
  GTTCTGCCTG TATGGGTTTC ATAAAATAGC ATGCCTCAGG GAAATGTATA GTAGGAATAC
  ATTCTGAGTC ATGTCACGGA GGTGAAGAGA GGCTGCACAC AGACGCTCAG CACTGGGCAG
  ATGGGATGGA CAACGGCTCA TTGCTATTCA AGTGTTCTTC TAGTCTGGAG AGGAGATGCA
  R
  CATGATAGGT ATAAAGGCTT CCTGAATCCC CTAGATACCG AGGTATTCCA TATACTCACT
  CTCAGTTTTA AGTCCTGCAG TACAAATACA TGTAATTTGG AGCCATATGG ATTATATTAT
  ATTTGGGTCA TCCTATGATC TGTTGGAAGA TCGATCCACT GGTCTGTTCA TTGGGACTTG
  GTGGGGCACT CCATGGGACG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss52363867	NES15389127	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs50891785					SNP	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52363867	NES15389127	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:30527593 () rs orientation: forward

Symbol	Name	Function Class
Gm28806	predicted gene 28806	1608 bp downstream
Tssr113087	transcription start site region 113087	1469 bp upstream