rs50892743 SNP Detail

Summary

• ID
  rs50892743
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  ChrX:95201823 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AGTTGATGTT GAGAAGTGGC CAGGTGATAT TCTATACTTG
  GTACCACTCT AGTACCAAAC TCCCTCTGGG GGAGGGCAAG CTACAGGCAA GTCCTAAATG
  M
  TGTGCTTTGC CCATTGCCTC ACCTTCCTGA GCCTCCCGAA TGTACTCTTT GTGTAGTTGG
  CTTATATCTA ATTGTGGAAA ATGGCAGAGC CAGGACTTCA A                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss134249674	ENSMUSSNP5717875	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50892743					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:95201823 () rs orientation: forward

Symbol	Name	Function Class
Msn	moesin	Intron
Rr692548	regulatory region 692548	within coordinates
Tssr161521	transcription start site region 161521	1866 bp upstream
Tssr161522	transcription start site region 161522	1924 bp upstream