rs50896699 SNP Detail

Summary

• ID
  rs50896699
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:12485703 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTCTGTAG TGAACTTATA
  TAGTTACTTC CTTCTTGTCA TTATTCTTAG AACATTTGGT ATTTACCACT TGCAGTTTAT
  TTACATTGTA CAGGTATTTT ATGTGCTTCA GGATATTAAA AATGTATGCA CAGATGTGTT
  TAGGTTATAT GAAAATACTA CAATTTTTAA AAACATTTAT TTTCCTTTTG CGTGAGGTGC
  R
  GTGGGGTGGG GTTAGACCAT GTGAGTGCAG TACCCACCAA GGCCAGAAGT GGGCACAATA
  TTCTCCTGGA GCCAGAGTTG GAGGTTGTAA GCTTCCTGAT GTTGGATTTT GGAGTTGAAT
  TCTGTTCCTC TGCAAGAGCA GACAGTTAAG AGCGATTCAT CTCCCCATTC CACACTACAC
  TCTGAAGGAA CATGAGCTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146299351	ENSMUSSNP6967151	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50896699					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:12485703 () rs orientation: forward

Symbol	Name	Function Class
Rr551920	regulatory region 551920	39 bp proximal