rs50899500 SNP Detail

Summary

• ID
  rs50899500
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:114952082 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGT CACAGAAAAT GTTTAGACAA
  G
  AATAGAGATA GGCTGTGATG AAGGT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss145319365	ENSMUSSNP1341385	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs50899500					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:114952082 () rs orientation: forward

Symbol	Name	Function Class
Gm34790	predicted gene, 34790	within coordinates
Rr280966	regulatory region 280966	1918 bp proximal
Rr389127	regulatory region 389127	1305 bp downstream