CCACCTCACC TGGCAGAAAA GTGGCTGGCT TCACTCTGGG GACTTGATTA ATTCCAGTAC ACAGTTAGGC TTGAACTGGT CATTTTGTCT AAGTGTGATT TCTTGCGAGC TTCTAGTGGC GAGAGTTATA TTAAGTGTCT TATGGCACTA GGATACGAGA ATGGTTACCA GCCTGGACTC AGCTGGGATG AGGGCAGGGC G GTGATGACAC AGAATGTGTC ACACTCTGTG AGTGAGTCAT ACAGGCAAGT GCTGTGCTGA GCTGGGCAGT CATCTATCTG GCCCTGCCCC TGAACCTGCT TCTGGCCTTC CTTGACTCTG TTCACTGCAA GGAATTCATG TGACCTCACA GCTCCGTCTG GCATGCCACA GGAAGACTTG GGGTTACCAA GCCTGCTCTT G = G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
DBA/2J |
---|---|---|---|---|---|---|---|
ss148929917 | ENSMUSSNP735251 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G |
SNP Consensus Information | |||||||
SNP | Consensus Type | A/J |
DBA/2J |
||||
rs50900106 | SNP | G | G |
Location: Chr5:101009818 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm73351 | predicted gene, 73351 | 64 bp upstream | ||||||
Gpat3 | glycerol-3-phosphate acyltransferase 3 | within coordinates | ||||||
Rr378349 | regulatory region 378349 | 480 bp upstream | ||||||
Rr615578 | regulatory region 615578 | 415 bp distal | ||||||
Rr615579 | regulatory region 615579 | within coordinates | ||||||
Rr615580 | regulatory region 615580 | 75 bp proximal | ||||||
Tssr47495 | transcription start site region 47495 | 65 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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