rs50906691 SNP Detail

Summary

• ID
  rs50906691
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:44389877 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTG TGTGTGCGCG CGCACACGCA
  Y
  ACATGTAAGT GTGCAAAATA GATGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148336786	ENSMUSSNP915144	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321524369	CHEV_5_44623774	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs50906691					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:44389877 () rs orientation: forward

Symbol	Name	Function Class
Gm35959	predicted gene, 35959	within coordinates
Gm42984	predicted gene 42984	within coordinates
Gm72570	predicted gene, 72570	389 bp downstream
Rr610954	regulatory region 610954	1459 bp proximal