rs50909796 SNP Detail

Summary

• ID
  rs50909796
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:79151400 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGAGTGGGG CATTATTCTA TACTAAGAAG AAGTCCAGAG
  CATGGGTGGA AAGAAGTGGT CAGACAGTAT GTGATCTCAT TTGTGATAGA AGAAATGTAT
  Y
  TGTGCTTTTG TGCACATTGA AGTCTTCCAG AAGGCTGCAC AAGAATCAGT TATGGATGTA
  AGATTAGAAA TCTGGAGTGA GATAAAGGTT TGTTTCTTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss52508679	NES15574198	PERLEGEN	MM_PANEL2	f	SNP			C	T	C	C
ss139802680	ENSMUSSNP916729	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs50909796					SNP	C	T	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52508679	NES15574198	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:79151400 () rs orientation: forward

Symbol	Name	Function Class
Rr293691	regulatory region 293691	200 bp proximal
Rr293692	regulatory region 293692	600 bp proximal
Rr369884	regulatory region 369884	333 bp upstream
Vwa8	von Willebrand factor A domain containing 8	within coordinates