rs50914337 SNP Detail

Summary

• ID
  rs50914337
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78754940 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTCTGGAT TCTTAGCCCT
  TGAAAGAAAG AAAATAAAAC ACAATACAAC TTTAAAGTTA CAATTTTCAA CAACTTAAAA
  TGTTTATACA AGTGATCTCA AAATTGAGAG TAGGCTATAT TTTCCCAACT ATGTCAATAA
  AACCTTAGAC TCAAAATTTT TTTTCCTTGA GAGTTTTCTG TTTGGACAGC GATTGCTGTG
  R
  CTTTTGGGAG CATGCACTTG AAAATGTAAA TTAAAATGTT TTTGCCACTG TAGTGAGGAT
  CAATGATTCC AGTAGTCTTG GACTTTATAC ACACACACAC ACACACACAC ACACACACAC
  ACACACACAC ACACAGACTA TATGCACAAA TGTGCCAGTC ACAGGGTTCC AGGAATGACT
  GAGTCATTGA GAAAAGTCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	SM/J	WSB/EiJ
ss61426020	NES16807124	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	G	A	A	A	A		A		G
ss136670538	ENSMUSSNP3905232	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A					A
ss323017421	CHEV_9_78695465	CHEVERUD	SCREENING_POP	f	SNP											A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	SM/J	WSB/EiJ
rs50914337					SNP	G	G	A	A	A	G	A	A	A	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61426020	NES16807124	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78754940 () rs orientation: forward

Symbol	Name	Function Class
Rr210878	regulatory region 210878	261 bp proximal