rs50915290 SNP Detail

Summary

• ID
  rs50915290
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:126837861 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACAGGCAAA GGAAGGGAAG ATGCAGAGTG GGGGTTATAC
  TAAGGTAGCT GCGTTTCATC AGTAATGTTT TAAAGGTCAT TTAAAAATTC TAATACAGCC
  R
  GGCATGGTGG CACACGCCTT TAATCCCAGC ACTCGGGAGG CAGAGGCAGA CGGATTTCTG
  AGTTCGAGGC CAGCCTGGTC TACAAAGTGA GCTCCAGGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss147516152	ENSMUSSNP5855547	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss320498722	CHEV_2_126821677	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs50915290					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126837861 () rs orientation: forward

Symbol	Name	Function Class
Rr564430	regulatory region 564430	1175 bp distal
Rr564431	regulatory region 564431	728 bp proximal