rs50932751 SNP Detail

Summary

• ID
  rs50932751
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:78246916 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACTGTTGC ATTGGTCCCT
  CTGGATCTCA GCGACTCTGG TGTCGGCAGG GTCCGGCCGG GCCTGGCTTC CGCCGGGTAC
  TCACGTGCCT CCGTCGTGTG AAAAGCATGG ACAAGCTGGG CAATGGTCCT TCCTAGTTCT
  TCCTGTGAGG GAAACAGGAA GCACACGCTC AGGCCCCGAA GCACAGTGGC TCTGACGGCC
  R
  ACACTACCAA TGCCCTCTCA CTTCAAAGGA CCAGCTGCCA GTTGGCCTTG GTTCCTTGCT
  TGCAAAAGAC CTACTATGGG GCTGGAGAGA TGGGTTAGTG GTTAAGAGCA CCAATAGCTC
  TTCCAAAGGT CCTGAGTTCA AATCCCAGCA ACCACATGGA AAAAAAAAAA AGACCTACTA
  TGCAGGAAAC ATCACTTTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss52381610	NES15270787	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs50932751					SNP	A	A	A	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52381610	NES15270787	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:78246916 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1780	CpG island 1780	1237 bp proximal
Rr225082	regulatory region 225082	484 bp proximal
Rrp1	ribosomal RNA processing 1	within coordinates
Tssr3266	transcription start site region 3266	1838 bp downstream
Tssr98302	transcription start site region 98302	1769 bp downstream
Tssr98303	transcription start site region 98303	1867 bp downstream