rs50938239 SNP Detail

Summary

• ID
  rs50938239
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:102547659 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTAGTCCA TCAATTATGT
  GAGAGTTGTC ATTAATTGTC TTTGGAGATA AATTCACAGA TACATTCAGA AGTGTGGTGA
  ATTCTCCAGG TAGATCTTAA TCCAGTTTAA TCCATTCAAG TTGACAGCTG AGATTAACCA
  TCAATGTAGA AATGCAGAAT TTAATAGCAC CAGGGAAAGA CTCCAAAATT AGGTAGAAAA
  K
  GAACAGAGTT GTTAACATTC TGAGTAGAGT CACTAACAAT TGCCTGGGAA AGTTGTGAGT
  GATGTCAGTC CACACAAGTG GCAGCTATAG TACATTGAAT CTGTCAACAG AATTAATCAT
  ATTGTCACAA TTTGAGACAA TGAGATAAAA TGGACAGTCA ACACTGAATA GATAGTAGAT
  TATCCTAAGC AAGGTTTTTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ
ss61042896	NES16081806	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ
rs50938239					SNP	G	G	G	G	G	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61042896	NES16081806	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:102547659 () rs orientation: forward

Symbol	Name	Function Class
Or51a8	olfactory receptor family 51 subfamily A member 8	1890 bp upstream