rs50956691 SNP Detail

Summary

• ID
  rs50956691
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:102982051 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAGAACA ATTACACCAA
  ATGTTAAAGT AATAAACACT CACTTAGGAA AACTAGAAAA TAGTAACTTA AAAAGTCACA
  TAGTCTTGTT GAGGGATTCA CAAAACATTT CCGAGTTCAG CGTCTCAGTC TGTGGGTTAT
  GGGAGAGTAA GAACGCCGTT AAGAATACAG TTGCATTTCT GTTACACCTG GGATTGTTCA
  R
  CTTTTGGGCA GGATAAACTT TAGCTTAACA TAATGTGATG ACGATTATGT ATTTATTCCA
  AGTGCTTCCT AAAACCATTT GAAATGGCTG GATGATATTT GAGTTTTCTT AGTTATCTCC
  TGCGGTTTTT TTTTTAAACC ATATTTTACA TGTATAAACG TCCTCCTGAC CTTATTTGCA
  TCTAAAACTT TCAGAAATGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60430144	NES15929897	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs50956691					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60430144	NES15929897	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:102982051 () rs orientation: forward

Symbol	Name	Function Class
Ampd1	adenosine monophosphate deaminase 1	within coordinates
Tssr30962	transcription start site region 30962	702 bp downstream
Tssr30963	transcription start site region 30963	687 bp downstream