rs50958626 SNP Detail

Summary

• ID
  rs50958626
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:34081779 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACACAATGT TAATCAGCTT
  GAAAAAGCAG GCTTTGCCAT TTGCCTCGAC ATTCTGCTAA GTGAAACAAT CAAAGTGTAG
  ACAGACAAAT GTTGAATGAC CTCACTTGTA TGTTTAGTCT ACAAAAGCCA AATCCACCGA
  TGCAGAGAGT AGTGGTGACA GGGATGGCAC ACTGAATAAA AGCACAGATC TGTGCTGGCC
  G
  CGGGGCTCAG GTGGGAGGGT TCTTGCCTAG TGTGCATGAA GCCCCAAGTC AGATATGGTG
  GCCCACACCT CTAATCTCAG CACTCCGGAC TCAGGTATAG GCAAGATGAT TAGACATTCA
  AAGACACAAG CTCCAGGCCA GCCTGGAATC CACAAGTCCC TGTTCAAAAA AACCAACCAG
  ACAACCAGAT TACCTTCCCA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss139269713	ENSMUSSNP6415663	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50958626					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:34081779 () rs orientation: forward

Symbol	Name	Function Class
Tssr128062	transcription start site region 128062	1558 bp upstream
Tssr128063	transcription start site region 128063	754 bp upstream