GGCCTCAAAT TCAAGGATCC CCTTGCCTTT GCGCCCCTTC CCCCATGTTT TGATTCTAGG CTTGCGGCAC CACACCCAAC AAACCTTTTT TCTTTCAAAA S ACTGGCATGT ATCAGAACAA TACAGTGATT GTAAAAATCC TACAGAAAAA AAAAAAAATC GACAAGCTGC CTCAAAACTA AAACTTCAAC TTTTTATTA S = C/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss132435329 | ENSMUSSNP1962550 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | ||
ss323749423 | CHEV_11_74520172 | CHEVERUD | SCREENING_POP | f | SNP | C | G | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129X1/SvJ |
DBA/2J |
LG/J |
SM/J |
||||
rs50959925 | SNP | G | G | C | G |
Location: Chr11:74597496 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
D11Mit352 | DNA Segment, Chr 11 Massachusetts Institute of Technology 352 | 565 bp proximal | ||||||
Pafah1b1 | platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 | within coordinates | ||||||
Rr386282 | regulatory region 386282 | within coordinates | ||||||
Tssr109134 | transcription start site region 109134 | 1040 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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