rs50963029 SNP Detail

Summary

• ID
  rs50963029
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:31468581 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CCTGACTAAG ACAGTGGGTA AAAGCCACAC ATTCAAAAGT
  ACTTGGTCAG CTCATATTTG ATGGATTAAA AAGATCAGCA CCCTAGCCAG GCAGTGGTGG
  M
  GCACGCCTTT AGTCCCAGCA CTTGGGAGGC AGAGGCAGGT GGATTTCTGA GTTCGAGGCC
  AGCCTGGTCT ACAAAGTGAG TTCCAGGACA GCCAGGGCTA C                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147445875	ENSMUSSNP2790089	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50963029					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:31468581 () rs orientation: forward

Symbol	Name	Function Class
Marchf6	membrane associated ring-CH-type finger 6	Intron
Tssr133930	transcription start site region 133930	514 bp upstream
Tssr133931	transcription start site region 133931	483 bp upstream
Tssr133932	transcription start site region 133932	455 bp upstream