rs50965593 SNP Detail

Summary

• ID
  rs50965593
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:67009641 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCCTCCCTC CTTTCTTTCT CCCAGACCTC TCTCTTTTTC
  AAGCAGGCTC AGAATTTTTT AAATGATAGC ATGTACCTTG TGATTCTCTG AGAGGCCCGG
  R
  GTGGCCTCCA GTTTGCTATG TAGCCGAGGC TTGCCACAAT TCTGATCCTT TGGTCTCAGC
  CTCCCAAAGG TACATACAAC TACATCCAGA TTATGAAGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss136577261	ENSMUSSNP5107072	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss322989548	CHEV_9_66950166	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs50965593					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:67009641 () rs orientation: forward

Symbol	Name	Function Class
Gm10646	predicted gene 10646	within coordinates
Gm22145	predicted gene, 22145	1849 bp upstream