rs50966798 SNP Detail

Summary

• ID
  rs50966798
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:83078297 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCACGAACT TCAAACAATA
  GGAATTTATC AGACATTTCT GGAGGGCAGA GTCTGGCTGC ATCTCCAGAT CTGGTCTTCT
  GTCTTCAGGT TTTGTGACTC TGCTGTCTGC CTCCCTCCCA GTCTGTTGGA AAGACTGGAC
  AGTTGAGGTT GTATTCAATG ATTTGTGTAA TCACTCCCTC TTGAGGCCCT TAGTCATACC
  Y
  GCAAATCCTT TTTGTTGTAT AGAGCAACAC ACCTGTGATT TTGTGGATTA CAGCAGGGAC
  AACTTGAGAG TCCTTATTCT GTCTATCACA ATTAGAAGTA GACTCTAGGG CTTTCAGAAA
  ATGTATTTAA AGGGGGCATC ATCTGGGGAG AATATCCTTT GCCTGTCTTT CTTTTCCTCT
  CTCTTCTGCC TCTTCCCTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss137926465	ENSMUSSNP1409323	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50966798					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:83078297 () rs orientation: forward

Symbol	Name	Function Class
Rgs6	regulator of G-protein signaling 6	within coordinates
Rr261712	regulatory region 261712	1504 bp proximal
Rr268571	regulatory region 268571	297 bp distal