rs50970819 SNP Detail

Summary

• ID
  rs50970819
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:71442532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGAGACCG AGGTGACCCT
  GGACTCTATA ATTCCATCTC TTATCTTTGT CTTCCACCAG AAGGATGGCA GAAGCTTCTA
  CTTCAGCTCC CTCTTCATTT GTGGAGCTGT GGAACTTCAC TGTGGAAATA CTTAAAAGTA
  GTTTCTGCTT CTTGGTTAGG TTTCAGGATC CAGGCTAGAG GGGGTACTTC TGTAAGCCAA
  Y
  GAGGACTGCA ATTGAGGCTT CTGTAGGTTA AATAACTACC CCCAGGCCAT GACAGGTAGC
  AAAAGACAGA ATTACTATTC AAAATATGGC CTCAGAGTTC ATAGTCTTTC CATACCCCAT
  GTGGTCTCTC AGAAAGAGTA TGAAGCAATT ATAAAGAAGG GAGGAAAAAT ATCCTCATGT
  GTGGACCATC GACAATGAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146746989	ENSMUSSNP605026	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50970819					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:71442532 () rs orientation: forward

Symbol	Name	Function Class
Gm74655	predicted gene, 74655	893 bp upstream
Gm74658	predicted gene, 74658	within coordinates
Rr558784	regulatory region 558784	1059 bp distal
Rr558785	regulatory region 558785	403 bp proximal
Rr558786	regulatory region 558786	904 bp proximal