rs50982689 SNP Detail

Summary

• ID
  rs50982689
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:93128452 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ATTCAAGTCA AATGTGGTAT CCCAGCACTA AGAGTAGGGA
  CTCAATGGGA TCTCCTACAC CTAACCAAGA AGTTATCACC AAAGAACAAC TACTTGGAAA
  S
  GAAAACTTAG TTTTCGCCAA TGGAGTCTCA CTGGGTTGAT AAATCCCATG TACAGCAGTA
  GATATCTTTT AGTTATTTTT TCCCTTGTAT AGTATGGTTT C                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	MSM/Ms
ss137969065	ENSMUSSNP2070591	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	MSM/Ms
rs50982689					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:93128452 () rs orientation: forward

Symbol	Name	Function Class
Gm59657	predicted gene, 59657	1909 bp upstream
Rr387632	regulatory region 387632	209 bp upstream
Rr470754	regulatory region 470754	1109 bp distal