rs50993950 SNP Detail

Summary

• ID
  rs50993950
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:91859795 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCGTAGCCA ACTTTTCAGA AACTACAGTT TGCTAGATGA
  GCAATCTACC ATAAGCATAG CATGACATCG TCCAATAGTA ATGACAGATG TAAGGAAAAC
  M
  GGTTCCATCC TTATTCGCAG AAAATACCAC CAGACTTCCT GCTCCTCTGA CTCTTAAAAA
  AAAAAAATGA TTGCATGCAT TTACACAGCT GAGCGAAGT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss145564027	ENSMUSSNP1712346	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss322789572	CHEV_8_93657066	CHEVERUD	SCREENING_POP	f	SNP		A	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs50993950					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:91859795 () rs orientation: forward

Symbol	Name	Function Class
Aktip	AKT interacting protein	within coordinates
Cpgi20808	CpG island 20808	251 bp proximal
Rr368579	regulatory region 368579	915 bp upstream
Rr667489	regulatory region 667489	within coordinates
Rr667490	regulatory region 667490	820 bp proximal
Tssr82405	transcription start site region 82405	782 bp downstream
Tssr82406	transcription start site region 82406	860 bp downstream