rs50999369 SNP Detail

Summary

• ID
  rs50999369
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70405641 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GACATGTAGT CCTTGATGTA ATCCTCAGAG CTCTGCCTTT
  CTGAGGCACA CACACCACAG TTGTGCTAGC CAGTGGGTTT TTTTTTTTTT TTTTTTTTAG
  K
  GTATTCATTT ATTTTCCCAC ATGTGATGTG ATTCTATACC CTGCAAACCC GATCCTAAGA
  GAAGCTTGGC AAGGGATGAG GAAAAACTGT CTCGCCCTTG C                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss133272817	ENSMUSSNP5507945	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50999369					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70405641 () rs orientation: forward

Symbol	Name	Function Class
Gm6157	predicted gene 6157	272 bp downstream
Igk	immunoglobulin kappa chain complex	within coordinates
Tssr61316	transcription start site region 61316	1311 bp downstream