rs50999517 SNP Detail

Summary

• ID
  rs50999517
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:126682339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAGC ATGCAGGCGG ACACAGTGCT
  R
  GAGAGGTAGC TGAGAGTTCT ACATC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147726545	ENSMUSSNP2397794	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss323528339	CHEV_10_126283526	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs50999517					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:126682339 () rs orientation: forward

Symbol	Name	Function Class
Gm66841	predicted gene, 66841	within coordinates
Rr440688	regulatory region 440688	1422 bp distal
Rr440689	regulatory region 440689	1569 bp distal
Rr440690	regulatory region 440690	541 bp distal