rs51000068 SNP Detail

Summary

• ID
  rs51000068
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117839703 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAACACAG ACATTTCAAA
  AGTCGCCCAT GTCTAACCCT GCACCTTCCT GGGTCCTGGT AAGTAGCTGG GGTATTTCCA
  TATCTTTCCT GCTACATGGT CCCCAAACCA TCATAAAACC CCTTTAGAGT CTTCCTGAAA
  AGAGGCAAGC ACATTTGGAA GAGCTTCTGT GGGTGACCTT AGCTGTTCTC TGCCGACAGA
  Y
  GACAGAACAA AGGATAATAA TAACTGCTCC GGAGGCTGCT GGAGCCAGAG CAGACTCACC
  AACGAACACC TGGTATGTGG CAAGTAGCCA AGAGGCATAA TTGCTCTTAG TGTTTTTTTT
  TTTTTTTTAT TAATAACAAC ACAAGAAGCA CTCGGGGCAA AATGACATTT GAAACAAGTC
  CTGGAAAGAT CTGTTTATAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss52224745	NES15323640	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs51000068					SNP	C	C	C	C	C	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52224745	NES15323640	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117839703 () rs orientation: forward

Symbol	Name	Function Class
Gm37852	predicted gene, 37852	1140 bp upstream
Igs80	intergenic site 80	1343 bp distal
Rr226004	regulatory region 226004	within coordinates
Rr385361	regulatory region 385361	1613 bp upstream