rs51003112 SNP Detail

Summary

• ID
  rs51003112
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:124937196 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGCTGGTTG GCACGGCTGA CCTGCTCTTC GATGCCCGAC
  AACACAACCT CACAGCCCAC GCACCTGTGG GAAGCAGGCA GATGAGAAGT CAGCAGGAGG
  M
  GGCAGTCATC ACAGCCTCAT AAAAACAAAG CAAACAAAAG CAAAAGTCTC AAAAGCTGGC
  CTCTAGGCTG GACTGAAAAC CCTCGCCTGA GCTGGCAGCT                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss60940878	NES16182948	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs51003112					SNP	C	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60940878	NES16182948	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:124937196 () rs orientation: forward

Symbol	Name	Function Class
Cops7a	COP9 signalosome subunit 7A	Intron
Tssr63233	transcription start site region 63233	655 bp upstream