rs51005007 SNP Detail

Summary

• ID
  rs51005007
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:70167049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACAT TTAGACCACC ACTTCCAGGG
  Y
  GCTGAGATCA CTGTGAAAGA TGAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145111181	ENSMUSSNP6337898	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss322696618	CHEV_8_72238298	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51005007					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:70167049 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20415	CpG island 20415	1979 bp proximal
Rr186712	regulatory region 186712	951 bp proximal
Rr400882	regulatory region 400882	1941 bp upstream
Zfp869	zinc finger protein 869	within coordinates