rs51006301 SNP Detail

Summary

• ID
  rs51006301
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31219942 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTGGCTAAG AGACACAGTG CCGGATAATT CAACCATCCT
  GCTTTCTCAC ACTGTGGCTC CCCCTGCAAA CACAGCAGAC TCCCCAGGAC ACTCACTGTG
  C
  CGCATGCTCC AGTTTGCAGA AGCACAGGGC TAGTGGTTAT AGCAGTGTTG TCTCTGCAGG
  GGCTGCTGCT GCCTCTCTTT GCAACCTGAC CCTGACCTT                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145453973	ENSMUSSNP6932950	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss325358229	CHEV_17_31137913	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51006301					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31219942 () rs orientation: forward

Symbol	Name	Function Class
Tssr143635	transcription start site region 143635	968 bp upstream
Umodl1	uromodulin-like 1	within coordinates