rs51016489 SNP Detail

Summary

• ID
  rs51016489
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33190738 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTCTAGCA AAGTGTAAAA
  CTCTCAGTGG AGCTGGTGAC TCATCTACAA CGCCGTTCCT TCTCCGGTCC GTGTAGCCCA
  TCATGAGCCT TAGAGAGCCT GGACAGTCCC AGTGCCACCT CTCGGCTATT TTCCAGGCAG
  GTTGTATTAA GAAATCTACA ATGCCTGTGA TGTGAATAGC AGAAAGAAGA GGTGCAGTTG
  Y
  ACAGTGCATT GCGGCAGCAC TGGCCAGGCG TTTGATATCT AGGGGGTGGG GGAAAACAAT
  GGGAAGGAGC TTCCCTGATG GACTCAATTT CATAATCCAT GAACTGGCAA TATGAGCTGT
  CTGTAGTATT CTGCCTAAGC ACCAAGCAGC CCTCGATTTG GAGTAGGAAA GCAACAGCCT
  ACAAGTAACC AGGCAGCAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss137582658	ENSMUSSNP5164177	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51016489					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33190738 () rs orientation: forward

Symbol	Name	Function Class
F730043M19Rik	RIKEN cDNA F730043M19 gene	within coordinates
Gm16267	predicted gene 16267	1100 bp downstream