rs51017281 SNP Detail

Summary

• ID
  rs51017281
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97149534 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCAGAAAGC AGAGCTCGGG
  AGAGGTTCCA AGGGAAGGGA AAACCCTCTA AACTGTTTGT CTAGGGGCTT TTTATAGGAT
  GGCAGGAACT AAAGAAAGAC GGAAGACATT TCTGTTATGG TTGGTTTATT CTCTGAATGT
  ATCACAAGTT GTGCCAATGG AGCCCCACAC TCTGTGCGTG TCCTGCAGGG AGATGTTCAC
  R
  GGCTGCATAC CTGTTGCTCT CACAGTTAGG GGAGTGGTCA CTCTTTGAAG CCCCTCTTCA
  TCTTTGGCTT GTTTGTGCGA TGTTGACCTT GTTGGCAGTT TGCCCCGGCT GCTGTGGCAG
  TGGCTGCAGC AACAGACCTT ACAGGTGGTG TGGTCTTGAA CTCTGGTGGG CTCTGCCAGC
  CATTATGTAT TCTGTTTTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss63609766	NES17041949	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A		G	A	A		G
ss325076435	CHEV_15_97082084	CHEVERUD	SCREENING_POP	f	SNP											A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs51017281					SNP	A	A	A	A	A	A	G	A	A	A	A	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63609766	NES17041949	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97149534 () rs orientation: forward

Symbol	Name	Function Class
Pced1b	PC-esterase domain containing 1B	within coordinates
Rr308785	regulatory region 308785	1734 bp distal
Rr308786	regulatory region 308786	within coordinates