rs51022972 SNP Detail

Summary

• ID
  rs51022972
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:40530351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCTTCACAG AGGCAGAGAG AGAGAGGGGA AATGCAAAAA
  TCCATTTCTG GTCTGAAGAA ATCCATTTTT GATTGTCAAA ACCCAAATCA GTGATTGAGT
  Y
  ACTTCTAAAT GATTATTCCC CCTTTGAAAT CCTCAGTCAA ACATAAGTTC ATAATTCTGT
  CATATATACT TGGCAGAAGA TAGTCTGAGG CGGGATAGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss149000211	ENSMUSSNP2549452	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51022972					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:40530351 () rs orientation: forward

Symbol	Name	Function Class
A230077H06Rik	RIKEN cDNA A230077H06 gene	within coordinates
Gm25784	predicted gene, 25784	1189 bp downstream
Gm28307	predicted gene 28307	within coordinates