rs51023076 SNP Detail

Summary

• ID
  rs51023076
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:118171842 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATCTGAGA CCCAATGGAT
  TAGGAAGCCC CAGTAGTGTA GCACAAATGT CTCCTGACAA CTATGAAGGG AGGGACTACA
  GAATAGAACA TTGATTGCCA CCTGCTTCTC CACCCACGCC AGATGGTAGC AGCTGGCTCT
  AGGTTCTCAC AGGCTGCATG AAATGAGTCA GCTACCTGGA GTCTTCCTAC CTACGAAGAA
  K
  CCTGGGAAAT GACCATTTTT ACTGTGACCC ACAAAACGCA GTGAGACAGA ATTTTAAGTT
  TTACTTGACC ATGTCTAACA CATAGACACA TGCACACACA CTGAGTGTGT CTAACACGTA
  GACACATGTA CACACACTGA GTGTGTCCAC ACGTAGACAC ATGTACACAC ACTGAGTGTG
  TCTAACACAT AGACACATGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61231103	NES16848804	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51023076					SNP	T	T	T	T	T	T	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61231103	NES16848804	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:118171842 () rs orientation: forward

Symbol	Name	Function Class
Gm33088	predicted gene, 33088	1258 bp upstream