rs51032499 SNP Detail

Summary

• ID
  rs51032499
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:88188186 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGCCTTTG TGGGGGTGGA
  CAAGCATGCT CTCCCATGTG TCCTGATGTG TACTCACAGC GGGGCATGGT GACAGGCAAG
  GGGAGATCAA ACTACTGCCC AGCCTGTCCC CAGGGACCTT GTTCCTAAAG CAAAAAGGCA
  GATGCATGCA TAGACACTGT GAAGCGCTAC ACCTGGGAGA CGGTACTCAC ACAAAGCCTA
  C
  CCTTCCCCTT TCTCAGAGAC CCGAGATTAT CAGTGTTTGG GCCACTGGAT CAGGAGTCTA
  GTGGGGCCCG CCCGGAACAG TTTGGTGGGG CAACCAAAAG GGTAATTAGT CCCATGGCTA
  GAAATCTGGA AGGGGAAGAA AAGAGAGCAA GGACAACTTT CTCATCCTTG GGTTGCTACT
  GAGGCCAGGG CAGGAAAAAA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss144898950	ENSMUSSNP296859	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51032499					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:88188186 () rs orientation: forward

Symbol	Name	Function Class
Mroh2a	maestro heat-like repeat family member 2A	within coordinates
Rr18061	regulatory region 18061	1186 bp distal
Rr18062	regulatory region 18062	1415 bp proximal
Rr35066	regulatory region 35066	within coordinates
Tssr7958	transcription start site region 7958	1339 bp downstream
Tssr7959	transcription start site region 7959	1319 bp downstream
Tssr7960	transcription start site region 7960	1296 bp downstream
Tssr7961	transcription start site region 7961	1267 bp downstream
Tssr7962	transcription start site region 7962	1107 bp downstream
Tssr7963	transcription start site region 7963	1077 bp downstream
Tssr7964	transcription start site region 7964	1050 bp downstream
Tssr7965	transcription start site region 7965	1026 bp downstream